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Karadeniz'in deniz sedimentlerinden izole edilen Gram-negatif heterotrofik bakterilerin antibiyotik direnci-CLSI ve EUCAST'ın çevresel izolatlar üzerinde karşılaştırılması

Year 2022, Volume: 7 Issue: 2, 163 - 170, 30.06.2022
https://doi.org/10.35229/jaes.1039437

Abstract

Deniz sedimentleri, antibiyotiklerin ve dirençli genlerin önemli rezervuarlarıdır. Antibiyotik direnci günümüzde küresel bir sorun haline gelmektedir ve deniz sedimentlerinden gelen bakteriler, çoklu mikrobiyal ajanlara direnç göstermektedir. Bu çalışma, Karadeniz'in deniz sedimentlerinden izole edilen Gram-negatif heterotrofik bakterilerin antibiyotik direncini araştırmaktadır. Örnekler, Mayıs 2019 ile Şubat 2020 arasında Karadeniz'deki çeşitli örnekleme istasyonlarından toplanmıştır. VITEK 2 sistemi, farklı antibiyotiklere karşı MIC değerlerini otomatik olarak tespit etmek için kullanılmıştır. MİK değerleri 0.12 µg/ml ile 80 µg/ml arasında değişiklik göstermiştir. Tüm antibiyotikler arasında en yüksek direnç oranları sefazoline karşı CLSI'de %90 ve EUCAST'da %81 olarak tespit edilmiştir. Direnç oranları genel olarak CLSI'de %13.4, EUCAST’da ise %26,1 olarak belirlenmiştir. Tüm izolatların meropenem, sefepim, seftazidim, kolistin, ertapenem ve piperasilin/tazobaktama duyarlı olduğu tespit edilmiştir. MAR indeksleri 0 ile 0.45 arasında bulunmuştur. Tüm izolatlarda 0.2 değerinin üzerinde veya eşit olan MAR indeksi CLSI'de %27 ve EUCAST'ta %81 olarak tespit edilmiştir. Bu çalışma, doğal izolatlar arasında antibiyotik maruziyetini gösterme açısından EUCAST'ın CLSI'den daha iyi olabileceğini ve MAR indeksinin çevresel durumu tanımlamada yararlı bir araç olabileceğini belirtmektedir. Bu çalışmanın sonuçları, Karadeniz sedimentlerinde antibiyotik direncinin ciddi bir endişe kaynağı olabileceğini göstermektedir.

References

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Antibiotic Resistance of Gram-negative Heterotrophic Bacteria on the Marine Sediments of the Black Sea-Comparison of CLSI and EUCAST on the Environmental Isolates

Year 2022, Volume: 7 Issue: 2, 163 - 170, 30.06.2022
https://doi.org/10.35229/jaes.1039437

Abstract

Marine sediments are the important reservoirs of antibiotics and resistant genes. Antibiotic resistance becomes a global concern today and bacteria from marine sediments show resistance to multiple microbial agents. This study investigates antibiotic resistance of Gram-negative heterotrophic bacteria from the marine sediment of the Black Sea. The samples were gathered from various sampling locations on the marine environments of the Black Sea between May 2019 and February 2020. The VITEK 2 system was utilized to detect the MIC values against different antibiotics automatically. The MIC values were ranged from 0.12 µg/ml to 80 µg/ml. The highest resistance ratios among all antibiotics were detected as 90% in CLSI and 81% in EUCAST against cefazolin. In general, the resistance ratios were determined as 13.4% in CLSI and 26.1% in EUCAST. All isolates were detected as susceptible to meropenem, cefepime, ceftazidime, colistin, ertapenem, and piperacillin/tazobactam. MAR indexes were ranged between 0 and 0.45. MAR index were detected above or equal the value of 0.2 as 27% in CLSI and 81% in EUCAST among all isolates. This study shows that EUCAST may be better than CLSI in terms of showing the antibiotic exposure among natural isolates and the MAR indexes may be a useful tool for defining the environmental status. The results of this study indicate that antibiotic resistance may be a serious concern in sediments of the Black Sea.

References

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  • Jacome, M. P. O., & Gonzales-Zubiate, F. A. (2019). How to stop the spreading of super bacteria?. Brasil Para Todos-Revista Internacional, 7(1), 10-14.
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  • Kim, K. R., Owens, G., Kwon, S. I., So, K. H., Lee, D. B., & Ok, Y. S. (2011). Occurrence and environmental fate of veterinary antibiotics in the terrestrial environment. Water, Air, & Soil Pollution, 214(1), 163-174. DOI: 10.1007/s11270-010-0412-2
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  • Krumperman, P. H. (1983). Multiple antibiotic resistance indexing of Escherichia coli to identify high-risk sources of fecal contamination of foods. Applied and environmental microbiology, 46(1), 165-170. DOI: 10.1128/AEM.46.1.165-170.1983
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  • Matyar, F., Kaya, A., & Dinçer, S. (2008). Antibacterial agents and heavy metal resistance in Gram-negative bacteria isolated from seawater, shrimp and sediment in Iskenderun Bay, Turkey. Science of the Total Environment, 407(1), 279-285. DOI: 10.1016/j.scitotenv.2008.08.014
  • McEwen, S. A., & Collignon, P. J. (2018). Antimicrobial resistance: a one health perspective. Microbiology spectrum, 6(2), 6-2. DOI: 10.1128/MICROBIOLSPEC.ARBA-0009-2017
  • Mikolay, A., Huggett, S., Tikana, L., Grass, G., Braun, J., & Nies, D. H. (2010). Survival of bacteria on metallic copper surfaces in a hospital trial. Applied microbiology and biotechnology, 87(5), 1875-1879. DOI: 10.1007/s00253-010-2640-1
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There are 55 citations in total.

Details

Primary Language English
Journal Section Articles
Authors

Samet Kalkan 0000-0002-5110-5609

Early Pub Date June 16, 2022
Publication Date June 30, 2022
Submission Date December 21, 2021
Acceptance Date March 21, 2022
Published in Issue Year 2022 Volume: 7 Issue: 2

Cite

APA Kalkan, S. (2022). Antibiotic Resistance of Gram-negative Heterotrophic Bacteria on the Marine Sediments of the Black Sea-Comparison of CLSI and EUCAST on the Environmental Isolates. Journal of Anatolian Environmental and Animal Sciences, 7(2), 163-170. https://doi.org/10.35229/jaes.1039437


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